ImageD  v2_7_5 (24.06.22)
ImageD is an image processing software designed for rapid prototyping and implementing algorithms and solutions for science, research and teaching.
D_Bio_NucleusPedigree Member List

This is the complete list of members for D_Bio_NucleusPedigree, including all inherited members.

add_nucleus_blob(size_t t, size_t y, size_t x, D_Bio_NucleusBlob nuc)D_Bio_NucleusPedigree
attrib_data(size_t i_data_pt_lvl, size_t i_att_lvl_nuclife, size_t i_att_lvl_nucblob, size_t i_att_nuclife, size_t i_att_nucblob, size_t i_att_foc, size_t ch_val, size_t ch_foc, size_t stat_low, size_t stat_high)D_Bio_NucleusPedigree
attrib_foci(size_t i_attrib, size_t ch_val)D_Bio_NucleusPedigree
attrib_foci(size_t i_attrib, size_t ch_val, size_t ch_foc)D_Bio_NucleusPedigree
attrib_nucblob(size_t i_attrib, size_t ch_val)D_Bio_NucleusPedigree
attrib_nuclife(size_t i_attrib)D_Bio_NucleusPedigree
calc_NucLifes()D_Bio_NucleusPedigree
calc_NucLifes_Filtered()D_Bio_NucleusPedigree
clear()D_Bio_NucleusPedigree
D_Bio_NucleusPedigree()D_Bio_NucleusPedigree
event_check(int *t_event, int *y_event, int *event_x, D_Bio_NucleusLife *pNucLifeTest, int type, int param)D_Bio_NucleusPedigree
event_counts(vector< int > vType_Param, int t_min, int y_min, int x_greater_than, bool filter_use_t_after, int filter_param_t_after, bool filter_use_t_before, int filter_param_t_before, bool filter_use_range, int filter_param_x_min, int filter_param_x_max, int filter_param_y_min, int filter_param_y_max, bool filter_no_excluded)D_Bio_NucleusPedigree
event_find(QString *QS_FoundEventType, int *t_found, int *y_found, int *x_found, vector< int > vType_Search, vector< int > vType_Param, int t_min, int y_min, int x_greater_than, bool filter_use_t_after, int filter_param_t_after, bool filter_use_t_before, int filter_param_t_before, bool filter_use_range, int filter_param_x_min, int filter_param_x_max, int filter_param_y_min, int filter_param_y_max, bool filter_no_excluded)D_Bio_NucleusPedigree
event_find(int *t_found, int *y_found, int *x_found, int type, int param, int t_min, int y_min, int x_greater_than, bool filter_use_t_after, int filter_param_t_after, bool filter_use_t_before, int filter_param_t_before, bool filter_use_range, int filter_param_x_min, int filter_param_x_max, int filter_param_y_min, int filter_param_y_max, bool filter_no_excluded)D_Bio_NucleusPedigree
EVENT_TYPE enum nameD_Bio_NucleusPedigree
EVENT_TYPE_EXCLUDED enum valueD_Bio_NucleusPedigree
EVENT_TYPE_LARGE_DIST_BETWEEN_NUC enum valueD_Bio_NucleusPedigree
EVENT_TYPE_MITOSIS enum valueD_Bio_NucleusPedigree
EVENT_TYPE_NUMBER_OF enum valueD_Bio_NucleusPedigree
EVENT_TYPE_SHORT_LIFE_BETWEEN_MITOSES enum valueD_Bio_NucleusPedigree
EVENT_TYPE_SHORT_LIFE_ISOLATED enum valueD_Bio_NucleusPedigree
EVENT_TYPE_SHORT_LIFE_LOOSE_END enum valueD_Bio_NucleusPedigree
EVENT_TYPE_SHORT_LIFE_LOOSE_START enum valueD_Bio_NucleusPedigree
get_NucleusLifesCount(bool filtered)D_Bio_NucleusPedigree
get_pNuclei_FromNucLifes(bool filtered_only)D_Bio_NucleusPedigree
get_pNucleus(size_t t, size_t y_mosaic, size_t x_mosaic, size_t i)D_Bio_NucleusPedigree
get_pNucleus(size_t t, size_t y_mosaic_min, size_t x_mosaic_min, size_t y_mosaic_max, size_t x_mosaic_max, size_t y_pos_px, size_t x_pos_px)D_Bio_NucleusPedigree
get_pNucleusLife(size_t index, bool filtered)D_Bio_NucleusPedigree
info()D_Bio_NucleusPedigree
info_debug()D_Bio_NucleusPedigree
info_popup()D_Bio_NucleusPedigree
initMatching(vector< double > score_weights, vector< double > score_maxima, double shift_limit, double max_rel_area_inc_to, double max_rel_area_dec_to, double max_age, double thres_tm1_go1, double thres_tm2_go1, double thres_tm3_go1, double thres_tm1_go2, double thres_tm2_go2, double thres_tm3_go2, double mitosis_mult_go1, double mitosis_mult_go2)D_Bio_NucleusPedigree
load_nuclei_data(QString QS_path_NucDataMaster, QString QS_path_NucData, size_t nt, size_t ny, size_t nx, bool forget_contour, bool foci_are_part_of_nuc_files)D_Bio_NucleusPedigree
match_all()D_Bio_NucleusPedigree
match_all_go1()D_Bio_NucleusPedigree
match_all_go2()D_Bio_NucleusPedigree
match_load_data_and_matches(QString QS_path_NucDataMaster, QString QS_path_NucData, QString QS_path_NucLifes, size_t nt, size_t ny, size_t nx, bool forget_contour, bool foci_are_part_of_nuc_files)D_Bio_NucleusPedigree
match_load_matches(QString QS_path_NucLifes)D_Bio_NucleusPedigree
match_save_results(QString QS_path)D_Bio_NucleusPedigree
match_time_correct_mitosis_go1(size_t t)D_Bio_NucleusPedigree
match_time_correct_mitosis_go2(size_t t)D_Bio_NucleusPedigree
match_time_go1(size_t t)D_Bio_NucleusPedigree
match_time_go2(size_t t)D_Bio_NucleusPedigree
mosaik_index_non_empty_max_x()D_Bio_NucleusPedigree
mosaik_index_non_empty_max_y()D_Bio_NucleusPedigree
mosaik_index_non_empty_min_x()D_Bio_NucleusPedigree
mosaik_index_non_empty_min_y()D_Bio_NucleusPedigree
nuclei_blob_count(size_t t, size_t y, size_t x)D_Bio_NucleusPedigree
nuclei_blob_count(size_t t)D_Bio_NucleusPedigree
nuclei_blob_count()D_Bio_NucleusPedigree
QSL_EventTypeD_Bio_NucleusPedigree
rect_RegularRange_px()D_Bio_NucleusPedigreeinline
save_analysis(QString QS_SavePath)D_Bio_NucleusPedigree
set_attrib_filter(size_t filter_mode, size_t i_filt, bool is_active, size_t i_att, size_t i_comp, size_t i_ch, double thres_val)D_Bio_NucleusPedigree
set_attrib_filter_channels(QStringList channels_foc, QStringList channels_val)D_Bio_NucleusPedigree
set_attrib_filter_path(QDir *pDir_Save)D_Bio_NucleusPedigree
set_attrib_filter_scaling()D_Bio_NucleusPedigree
set_attrib_filter_ui(QGroupBox *box_foci, QGroupBox *box_nucblobs, QGroupBox *box_nuclifes)D_Bio_NucleusPedigree
set_channels(QStringList channels_foc, QStringList channels_val)D_Bio_NucleusPedigreeinline
set_earliest_mitoses_allowed(size_t t_earliest)D_Bio_NucleusPedigreeinline
set_FrameBorder_XY(Rect FrameBorder)D_Bio_NucleusPedigree
set_FrameInMargin_XY(int x_min, int x_max, int y_min, int y_max)D_Bio_NucleusPedigreeinline
set_FrameInMargin_XY(Rect FrameInRange)D_Bio_NucleusPedigreeinline
set_scale_edges(double scale)D_Bio_NucleusPedigreeinline
set_scale_nodes(double scale)D_Bio_NucleusPedigreeinline
set_scale_px2um(double scale)D_Bio_NucleusPedigreeinline
set_scale_T2h(double scale)D_Bio_NucleusPedigreeinline
set_size_time_and_mosaik(size_t t_size, size_t y_size, size_t x_size)D_Bio_NucleusPedigree
set_time_irradiation(double t_irr)D_Bio_NucleusPedigree
SetAttribFilterToNeedUpdate()D_Bio_NucleusPedigreeslot
setPedigreeViewer_Plot3D(D_Viewer_Plot_3D *viewer)D_Bio_NucleusPedigree
setPedigreeViewer_Volumetric(D_Viewer_3D *viewer)D_Bio_NucleusPedigree
size_T()D_Bio_NucleusPedigreeinline
size_X()D_Bio_NucleusPedigreeinline
size_Y()D_Bio_NucleusPedigreeinline
updatePedigreeView_Plot3D(size_t points_per_edge, size_t t_min=0, size_t t_max=size_t(INFINITY), double y_min_um=-INFINITY, double y_max_um=INFINITY, double x_min_um=-INFINITY, double x_max_um=INFINITY)D_Bio_NucleusPedigree
updatePedigreeView_Plot3D(D_Viewer_Plot_3D *viewer, size_t points_per_edge, size_t t_min=0, size_t t_max=size_t(INFINITY), double y_min_um=-INFINITY, double y_max_um=INFINITY, double x_min_um=-INFINITY, double x_max_um=INFINITY)D_Bio_NucleusPedigree
updatePedigreeView_Volumetric(size_t size_volT_px, size_t size_volY_px, size_t size_volX_px, size_t size_Node_px, size_t size_Edge_px, size_t size_Y_px_original, size_t size_X_px_original)D_Bio_NucleusPedigree
updatePedigreeView_Volumetric(D_Viewer_3D *viewer, size_t size_volT_px, size_t size_volY_px, size_t size_volX_px, size_t size_Node_px, size_t size_Edge_px, size_t size_Y_px_original, size_t size_X_px_original)D_Bio_NucleusPedigree