D_Bio_Focus Class Reference

#include <d_bio_focus.h>

Public Member Functions
	D_Bio_Focus ()
	D_Bio_Focus (vector< Point > contour_points, Point Offset=Point(0, 0))
	D_Bio_Focus (vector< Point > contour_points, vector< vector< double >> SignalStats_StatChannel, Point Offset=Point(0, 0))
	D_Bio_Focus (Point2f centroid, double area, double compactness, double convexity, vector< vector< double >> SignalStats_StatChannel, size_t ch_detected_in)
void	set_detected_in_channel (size_t ch_detected)
void	set_value_channels (size_t channels)
void	set_pNucOwner (D_Bio_NucleusBlob *owner)
D_Bio_NucleusBlob *	get_pNucOwner ()
double	attribute (size_t i_attrib, size_t ch_val, double scale_px2um)
Point2f	centroid ()
double	area ()
double	compactness ()
double	convexity ()
double	radius_circle_equivalent ()
double	overlap_area (D_Bio_Focus *pFocOther)
double	overlap_area_any_focus (size_t ch_foc)
double	overlap_area_any_focus ()
double	dist2centroid (Point2f point)
double	dist2contour_circle_equivalent (Point2f point)
bool	contains_point (Point P, double margin=0)
size_t	channels ()
double	signal_stat (size_t channel, size_t stat_local_id)
double	signal_median (size_t channel)
double	signal_dev2med (size_t channel)

Static Public Member Functions
static bool	attribute_is_value_channel_dependent (size_t i_attrib)
static bool	attribute_is_focus_channel_dependent (size_t i_attrib)

Constructor & Destructor Documentation

D_Bio_Focus() [1/4]

D_Bio_Focus::D_Bio_Focus

(

)

D_Bio_Focus() [2/4]

D_Bio_Focus::D_Bio_Focus	(	vector< Point >	contour_points,
		Point	Offset = Point(0, 0)
	)

D_Bio_Focus() [3/4]

D_Bio_Focus::D_Bio_Focus	(	vector< Point >	contour_points,
		vector< vector< double >>	SignalStats_StatChannel,
		Point	Offset = Point(0, 0)
	)

D_Bio_Focus() [4/4]

D_Bio_Focus::D_Bio_Focus	(	Point2f	centroid,
		double	area,
		double	compactness,
		double	convexity,
		vector< vector< double >>	SignalStats_StatChannel,
		size_t	ch_detected_in
	)

Member Function Documentation

area()

double D_Bio_Focus::area ( )

inline

attribute()

double D_Bio_Focus::attribute	(	size_t	i_attrib,
		size_t	ch_val,
		double	scale_px2um
	)

attribute_is_focus_channel_dependent()

bool D_Bio_Focus::attribute_is_focus_channel_dependent ( size_t  i_attrib )

static

attribute_is_value_channel_dependent()

bool D_Bio_Focus::attribute_is_value_channel_dependent ( size_t  i_attrib )

static

centroid()

Point2f D_Bio_Focus::centroid ( )

inline

channels()

size_t D_Bio_Focus::channels

(

)

compactness()

double D_Bio_Focus::compactness ( )

inline

contains_point()

bool D_Bio_Focus::contains_point ( Point  P, double  margin = 0  )

inline

convexity()

double D_Bio_Focus::convexity ( )

inline

dist2centroid()

double D_Bio_Focus::dist2centroid ( Point2f  point )

inline

dist2contour_circle_equivalent()

double D_Bio_Focus::dist2contour_circle_equivalent ( Point2f  point )

inline

get_pNucOwner()

D_Bio_NucleusBlob* D_Bio_Focus::get_pNucOwner ( )

inline

overlap_area()

double D_Bio_Focus::overlap_area

(

D_Bio_Focus *

pFocOther

)

overlap_area_any_focus() [1/2]

double D_Bio_Focus::overlap_area_any_focus

(

)

overlap_area_any_focus() [2/2]

double D_Bio_Focus::overlap_area_any_focus

(

size_t

ch_foc

)

radius_circle_equivalent()

double D_Bio_Focus::radius_circle_equivalent ( )

inline

set_detected_in_channel()

void D_Bio_Focus::set_detected_in_channel ( size_t  ch_detected )

inline

set_pNucOwner()

void D_Bio_Focus::set_pNucOwner ( D_Bio_NucleusBlob *  owner )

inline

set_value_channels()

void D_Bio_Focus::set_value_channels ( size_t  channels )

inline

signal_dev2med()

double D_Bio_Focus::signal_dev2med ( size_t  channel )

inline

signal_median()

double D_Bio_Focus::signal_median ( size_t  channel )

inline

signal_stat()

double D_Bio_Focus::signal_stat	(	size_t	channel,
		size_t	stat_local_id
	)

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The documentation for this class was generated from the following files:

• Code/d_bio_focus.h
• Code/d_bio_focus.cpp